Publications 2012

Letter to the editor on ‘Fumonisin contamination and fumonisin producing black Aspergilli in dried vine fruits of different origin, IJFM. 143:143–149’

Nielsen, Kristian Fog ; Logrieco, Antonio F.

in journal: International Journal of Food Microbiology (ISSN: 0168-1605) (DOI: http://dx.doi.org/10.1016/j.ijfoodmicro.2011.09.021), vol: 152, issue: 45, 2012

Type: Letter - Letter

DOI: 10.1016/j.ijfoodmicro.2011.09.021

Bioconversion of crude glycerol feedstocks into ethanol by Pachysolen tannophilus

Liu, Xiaoying ; Jensen, Peter Ruhdal ; Workman, Mhairi

in journal: Bioresource Technology (ISSN: 0960-8524) (DOI: http://dx.doi.org/10.1016/j.biortech.2011.10.065), vol: 104, pages: 559-586, 2012

Type: Journal article - Journal article

DOI: 10.1016/j.biortech.2011.10.065

Chemical and molecular characterization of Phomopsis and Cytospora-like endophytes from different host plants in Brazil

Abreu, Lucas M. ; Costa, Sarah S. ; Pfenning, Ludwig H. ; Takahashi, Jacqueline A. ; Larsen, Thomas Ostenfeld ; Andersen, Birgitte

in journal: Fungal Biology (ISSN: 1878-6146) (DOI: http://dx.doi.org/10.1016/j.funbio.2011.11.008), vol: 116, issue: 2, pages: 249-260, 2012

Type: Journal article - Journal article

DOI: 10.1016/j.funbio.2011.11.008

Adaptive evolution of drug targets in producer and non-producer organisms

Hansen, Bjarne Gram ; Sun, Xin E. ; Genee, Hans Jasper ; Kaas, Christian Schrøder ; Nielsen, Jakob Blæsbjerg ; Frisvad, Jens Christian ; Hedstrom, Lizbeth

in journal: Biochemical Journal (ISSN: 0264-6021) (DOI: http://dx.doi.org/10.1042/BJ20111278), vol: 441, issue: 1, pages: 219-226, 2012

Type: Journal article - Journal article

DOI: 10.1042/BJ20111278

Food fermentations: Microorganisms with technological beneficial use

Bourdichon, François ; Casaregola, Serge ; Farrokh, Choreh ; Frisvad, Jens Christian ; Gerds, Monica L. ; Hammes, Walter P. ; Harnett, James ; Huys, Geert ; Laulund, Svend ; Ouwehand, Arthur ; Powell, Ian B. ; Prajapati, Jashbhai B. ; Seto, Yasuyuki ; Ter Schure, Eelko ; Van Boven, Aart ; Vankerckhoven, Vanessa ; Zgoda, Annabelle ; Tuijtelaars, Sandra ; Hansen, Egon Bech

in journal: International Journal of Food Microbiology (ISSN: 0168-1605) (DOI: http://dx.doi.org/10.1016/j.ijfoodmicro.2011.12.030), vol: 154, issue: 3, pages: 87-97, 2012

Type: Journal article - Journal article

DOI: 10.1016/j.ijfoodmicro.2011.12.030

Robust, small-scale cultivation platform for Streptomyces coelicolor

Sohoni, Sujata Vijay ; Bapat, Prashant Madhusudhan ; Eliasson Lantz, Anna

in journal: Microbial Cell Factories (ISSN: 1475-2859) (DOI: http://dx.doi.org/10.1186/1475-2859-11-9), vol: 11, issue: 1, 2012

Type: Journal article - Journal article

DOI: 10.1186/1475-2859-11-9

Food as a Source for Quorum Sensing Inhibitors: Iberin from Horseradish Revealed as a Quorum Sensing Inhibitor of Pseudomonas aeruginosa

Jakobsen, Tim Holm ; Bragason, Steinn Kristinn ; Phipps, Richard Kerry ; Christensen, Louise Dahl ; van Gennip, Maria ; Alhede, Morten ; Skindersoe, Mette ; Larsen, Thomas Ostenfeld ; Høiby, Niels ; Bjarnsholt, Thomas ; Givskov, Michael

in journal: Applied and Environmental Microbiology (ISSN: 0099-2240) (DOI: http://dx.doi.org/10.1128/AEM.05992-11), vol: 78, issue: 7, pages: 2410-2421, 2012

Type: Journal article - Journal article

DOI: 10.1128/AEM.05992-11

The effect of cocoa fermentation and weak organic acids on growth and ochratoxin A production by Aspergillus species

Copetti, Marina V. ; Iamanaka, Beatriz T. ; Mororó, Raimundo C. ; Pereira, José L. ; Frisvad, Jens Christian ; Taniwaki, Marta H.

in journal: International Journal of Food Microbiology (ISSN: 0168-1605) (DOI: http://dx.doi.org/10.1016/j.ijfoodmicro.2012.01.026), vol: 155, issue: 3, pages: 158-164, 2012

Type: Journal article - Journal article

DOI: 10.1016/j.ijfoodmicro.2012.01.026

Ajoene, a Sulfur-Rich Molecule from Garlic, Inhibits Genes Controlled by Quorum Sensing

Jakobsen, Tim Holm ; van Gennip, Maria ; Phipps, Richard Kerry ; Shanmugham, M Sundaram ; Christensen, Louise Dahl ; Alhede, Morten ; Skindersoe, Mette Eline ; Rasmussen, Thomas Bovbjerg ; Friedrich, Karlheinz ; Uthe, Friedrich ; Jensen, Peter Østrup ; Moser, Claus Ernst ; Nielsen, Kristian Fog ; Eberl, Leo ; Larsen, Thomas Ostenfeld ; Tanner, David Ackland ; Høiby, Niels ; Bjarnsholt, Thomas ; Givskov, Michael

in journal: Antimicrobial Agents and Chemotherapy (ISSN: 0066-4804) (DOI: http://dx.doi.org/10.1128/AAC.05919-11), vol: 56, issue: 5, pages: 2314-2325, 2012

Type: Journal article - Journal article

DOI: 10.1128/AAC.05919-11

Fungal Origins of the Bicyclo[2.2.2]diazaoctane Ring System of Prenylated Indole Alkaloids

Finefield, Jennifer M. ; Frisvad, Jens Christian ; Sherman, David H. ; Williams, Robert M.

in journal: Journal of Natural Products (ISSN: 0163-3864) (DOI: http://dx.doi.org/10.1021/np200954v), vol: 75, issue: 4, pages: 812-833, 2012

Type: Journal article - Journal article

DOI: 10.1021/np200954v

Searching for eukaryotic life preserved in Antarctic permafrost

Zucconi, L. ; Selbmann, L. ; Buzzini, P. ; Turchetti, B. ; Guglielmin, M. ; Frisvad, Jens Christian ; Onofri, S.

in journal: Polar Biology (ISSN: 0722-4060) (DOI: http://dx.doi.org/10.1007/s00300-011-1119-6), vol: 35, issue: 5, pages: 749-757, 2012

Type: Journal article - Journal article

DOI: 10.1007/s00300-011-1119-6

Erratum to “Food fermentations: microorganisms with technological beneficial use” [International Journal of Food Microbiology 154 (2012) 87–97]

Bourdichon, François ; Casaregola, Serge ; Farrokh, Choreh ; Frisvad, Jens Christian ; Gerds, Monica L. ; Hammes, Walter P. ; Harnett, James ; Huys, Geert ; Laulund, Svend ; Ouwehand, Arthur ; Powell, Ian B. ; Prajapati, Jashbhai B. ; Seto, Yasuyuki ; Ter Schure, Eelko ; Van Boven, Aart ; Vankerckhoven, Vanessa ; Zgoda, Annabelle ; Tuijtelaars, Sandra ; Hansen, Egon Bech

in journal: International Journal of Food Microbiology (ISSN: 0168-1605) (DOI: http://dx.doi.org/ 10.1016/j.ijfoodmicro.2012.04.003), vol: 156, issue: 301, 2012

Type: Comment/debate - Comment/debate

DOI: 10.1016/j.ijfoodmicro.2012.04.003

Involvement of a Natural Fusion of a Cytochrome P450 and a Hydrolase in Mycophenolic Acid Biosynthesis

Hansen, Bjarne Gram ; Mnich, Ewelina ; Nielsen, Kristian Fog ; Nielsen, Jakob Blæsbjerg ; Nielsen, Morten Thrane ; Mortensen, Uffe Hasbro ; Larsen, Thomas Ostenfeld ; Patil, Kiran Raosaheb

in journal: Applied and Environmental Microbiology (ISSN: 0099-2240) (DOI: http://dx.doi.org/10.1128/AEM.07955-11), vol: 78, issue: 14, pages: 4908-4913, 2012

Type: Journal article - Journal article

DOI: 10.1128/AEM.07955-11

Prediction and identification of sequences coding for orphan enzymes using genomic and metagenomic neighbours

Yamada, Takuji ; Waller, Alison S. ; Raes, Jeroen ; Zelezniak, Aleksej ; Perchat, Nadia ; Perret, Alain ; Salanoubat, Marcel ; Patil, Kiran R. ; Weissenbach, Jean ; Bork, Peer

in journal: Molecular Systems Biology (ISSN: 1744-4292) (DOI: http://dx.doi.org/10.1038/msb.2012.13), vol: 8, 2012

Type: Journal article - Journal article

DOI: 10.1038/msb.2012.13

Redirection of pigment biosynthesis to isocoumarins in Fusarium

Sørensen, Jens Laurids ; Nielsen, Kristian Fog ; Sondergaard, Teis Esben

in journal: Fungal Genetics and Biology (ISSN: 1087-1845) (DOI: http://dx.doi.org/10.1016/j.fgb.2012.06.004), vol: 49, issue: 8, pages: 613-618, 2012

Type: Journal article - Journal article

DOI: 10.1016/j.fgb.2012.06.004

Comparison of laser diffraction and image analysis for measurement of Streptomyces coelicolor cell clumps and pellets.

Rønnest, Nanna Petersen ; Stocks, Stuart M ; Eliasson Lantz, Anna ; Gernaey, Krist

in journal: Biotechnology Letters (ISSN: 0141-5492) (DOI: http://dx.doi.org/10.1007/s10529-012-0936-1), vol: 34, issue: 8, pages: 1465-1473, 2012

Type: Journal article - Journal article

DOI: 10.1007/s10529-012-0936-1

Discovery of novel secondary metabolites in Aspergillus aculeatus

Petersen, Lene Maj ; Holm, Dorte Koefoed ; Gotfredsen, Charlotte Held ; Larsen, Thomas Ostenfeld

in journal: Planta Medica (ISSN: 0032-0943) (DOI: http://dx.doi.org/10.1055/s-0032-1320755), vol: 78, issue: 11, pages: 1159-1160, 2012

Type: Journal article - Journal article

Presented at: International Congress on Natural Products Research on Global Change, Natural Products and Human Health, New York City, NY

DOI: 10.1055/s-0032-1320755

Characterization of the AN6448 cluster in Aspergillus nidulans

Nielsen, Jakob Blæsbjerg ; Klejnstrup, Marie Louise ; Khorsand-Jamal, Paiman ; Holm, Dorte Koefoed ; Nielsen, Michael Lynge ; Kabat, Anna Monika ; Rank, Christian ; Gotfredsen, Charlotte Held ; Larsen, Thomas Ostenfeld ; Mortensen, Uffe Hasbro

in journal: Planta Medica (ISSN: 0032-0943) (DOI: http://dx.doi.org/10.1055/s-0032-1320546), vol: 78, issue: 11, pages: 1113-1113, 2012

Type: Conference abstract in journal - Conference abstract in journal

Presented at: International Congress on Natural Products Research on Global Change, Natural Products and Human Health/8th Joint Meeting of AFERP, ASP, GA, PSE and SIF, New York, NY

DOI: 10.1055/s-0032-1320546

Patulin and secondary metabolite production by marine-derived Penicillium strains

Vansteelandt, Marieke ; Kerzaon, Isabelle ; Blanchet, Elodie ; Fossi Tankoua, Olivia ; Robiou Du Pont, Thibaut ; Joubert, Yolaine ; Monteau, Fabrice ; Le Bizec, Bruno ; Frisvad, Jens Christian ; Pouchus, Yves François ; Grovel, Olivier

in journal: Fungal Biology (ISSN: 1878-6146) (DOI: http://dx.doi.org/10.1016/j.funbio.2012.06.005), vol: 116, issue: 9, pages: 954-961, 2012

Type: Journal article - Journal article

DOI: 10.1016/j.funbio.2012.06.005

Dynamics in population heterogeneity during batch and continuous fermentation of Saccharomyces cerevisiae

Heins, Anna-Lena ; Lencastre Fernandes, Rita ; Lundin, L. ; Carlquist, M. ; Sörensen, S. ; Gernaey, Krist ; Eliasson Lantz, Anna

in journal: New Biotechnology (ISSN: 1871-6784) (DOI: http://dx.doi.org/10.1016/j.nbt.2012.08.561), vol: 29S, pages: S199-S200, 2012

Type: Conference abstract in journal - Conference abstract in journal

Presented at: 15th European Congress on Biotechnology, Istanbul

DOI: 10.1016/j.nbt.2012.08.561

Development of a screening approach for exploring cell factory potential through metabolic flux analysis and physiology

Knudsen, Peter Boldsen ; Nielsen, Kristian Fog ; Thykær, Jette

in journal: New Biotechnology (ISSN: 1871-6784) (DOI: http://dx.doi.org/10.1016/j.nbt.2012.08.594), pages: S212, 2012

Type: Conference abstract in journal - Conference abstract in journal

Presented at: 15th European Congress on Biotechnology, Istanbul

DOI: 10.1016/j.nbt.2012.08.594

Establishing new microbial cell factories for sustainable bioprocesses

Workman, Mhairi ; Holt, Philippe ; Liu, Xiaoying

in journal: New Biotechnology (ISSN: 1871-6784) (DOI: http://dx.doi.org/10.1016/j.nbt.2012.08.211), vol: 29S, pages: S75, 2012

Type: Conference abstract in journal - Conference abstract in journal

Presented at: 15th European Congress on Biotechnology, Istanbul

DOI: 10.1016/j.nbt.2012.08.211

Screening of Aspergillus nidulans metabolites from habitat mimicking media using LC-DAD-TOFMS system

Klitgaard, Andreas ; Holm, Dorte Koefoed ; Frisvad, Jens Christian ; Nielsen, Kristian Fog

in journal: Planta Medica (ISSN: 0032-0943) (DOI: http://dx.doi.org/10.1055/s-0032-1320754), vol: 78, issue: P167, 2012

Type: Conference abstract in journal - Conference abstract in journal

Presented at: International Congress on Natural Products Research on Global Change, Natural Products and Human Health, New York City, NY

DOI: 10.1055/s-0032-1320754

Production of Monascus-like pigments

Frisvad, Jens Christian ; Meyer, Anne S. ; Mapari, Sameer Shamsuddin ; Thrane, Ulf

Type: Patent - Patent

New producers and new 11-, 19-, and 20-residue peptaibiotics: suzukacillins B and C

Roehrich, C. R. ; Iversen, Anita ; Degenkolb, T. ; Jaklitsch, W. M. ; Voglmayr, H. ; Thrane, Ulf ; Vilcinskas, A. ; Nielsen, Kristian Fog ; Brueckner, H.

in journal: Journal of Peptide Science (ISSN: 1075-2617), vol: 18, issue: S1, pages: S73-S73, 2012

Type: Conference abstract in journal - Conference abstract in journal

Presented at: 32nd EPS Meeting, Athens

Aspergillus bertholletius sp. nov. from Brazil Nuts

Taniwaki, Marta H. ; Pitt, John I. ; Iamanaka, Beatriz T. ; Sartori, Daniele ; Copetti, Marina V. ; Balajee, Arun ; Fungaro, Maria Helena P. ; Frisvad, Jens Christian

in journal: P L o S One (ISSN: 1932-6203) (DOI: http://dx.doi.org/10.1371/journal.pone.0042480), vol: 7, issue: 8, 2012

Type: Journal article - Journal article

DOI: 10.1371/journal.pone.0042480

GF-15, a Novel Inhibitor of Centrosomal Clustering, Suppresses Tumor Cell Growth In Vitro and In Vivo

Raab, Marc S. ; Breitkreutz, Iris ; Anderhub, Simon ; Rønnest, Mads Holger ; Leber, Blanka ; Larsen, Thomas Ostenfeld ; Weiz, Ludmila ; Konotop, Gleb ; Hayden, Patrick J. ; Podar, Klaus ; Fruehauf, Johannes ; Nissen, Felix ; Mier, Walter ; Haberkorn, Uwe ; Ho, Anthony D. ; Goldschmidt, Hartmut ; Anderson, Kenneth C. ; Clausen, Mads Hartvig ; Krämer, Alwin

in journal: Cancer Research (ISSN: 0008-5472) (DOI: http://dx.doi.org/10.1158/0008-5472.CAN-12-2026), vol: 72, issue: 20, pages: 5374-5385, 2012

Type: Journal article - Journal article

DOI: 10.1158/0008-5472.CAN-12-2026

Comparative chemistry of Aspergillus oryzae (RIB40) and A. flavus (NRRL 3357)

Rank, Christian ; Klejnstrup, Marie Louise ; Petersen, Lene Maj ; Kildgaard, Sara ; Frisvad, Jens Christian ; Gotfredsen, Charlotte Held ; Larsen, Thomas Ostenfeld

in journal: Metabolites (ISSN: 2218-1989) (DOI: http://dx.doi.org/10.3390/metabo2010039), vol: 2, pages: 39-56, 2012

Type: Journal article - Journal article

DOI: 10.3390/metabo2010039

Impact of stoichiometry representation on simulation of genotype-phenotype relationships in metabolic networks.

Brochado, Ana Rita ; Andrejev, Sergej ; Maranas, Costas D. ; Patil, Kiran R.

in journal: P L o S Computational Biology (ISSN: 1553-734X) (DOI: http://dx.doi.org/10.1371/journal.pcbi.1002758), vol: 8, issue: 11, pages: e1002758, 2012

Type: Journal article - Journal article

DOI: 10.1371/journal.pcbi.1002758

Gene Sequence Based Clustering Assists in Dereplication of Pseudoalteromonas luteoviolacea Strains with Identical Inhibitory Activity and Antibiotic Production

Vynne, Nikolaj Grønnegaard ; Månsson, Maria ; Gram, Lone

in journal: Marine Drugs (ISSN: 1660-3397) (DOI: http://dx.doi.org/10.3390/md10081729), vol: 10, issue: 8, pages: 1729-1740, 2012

Type: Journal article - Journal article

DOI: 10.3390/md10081729

Towards improved bioprocess operation: monitoring, modeling and control

Gernaey, Krist ; Eliasson Lantz, Anna ; Albæk, Mads Orla ; Krühne, Ulrich

Type: Conference abstract for conference - Conference abstract for conference

Presented at: Nordic Bioprocess Improvement Seminar 2, Kgs.Lyngby

Industrial glucoamylase fed‐batch benefits from oxygen limitation and high osmolarity

Pedersen, Lasse ; Hansen, Kim ; Nielsen, Jens ; Eliasson Lantz, Anna ; Thykær, Jette

in journal: Biotechnology and Bioengineering (Print) (ISSN: 0006-3592) (DOI: http://dx.doi.org/10.1002/bit.23287), vol: 109, issue: 1, pages: 116-124, 2012

Type: Journal article - Journal article

DOI: 10.1002/bit.23287

Identification of a Transcription Factor Controlling pH-Dependent Organic Acid Response in Aspergillus niger.

Poulsen, Lars ; Andersen, Mikael Rørdam ; Eliasson Lantz, Anna ; Thykær, Jette

in journal: P L o S One (ISSN: 1932-6203) (DOI: http://dx.doi.org/10.1371/journal.pone.0050596), vol: 7, issue: 12, pages: e50596, 2012

Type: Journal article - Journal article

DOI: 10.1371/journal.pone.0050596

Genetics of Polyketide Metabolism in Aspergillus nidulans

Klejnstrup, Marie Louise ; Frandsen, Rasmus John Normand ; Holm, Dorte Koefoed ; Nielsen, Morten Thrane ; Mortensen, Uffe Hasbro ; Larsen, Thomas Ostenfeld ; Nielsen, Jakob Blæsbjerg

in journal: Metabolites (ISSN: 2218-1989) (DOI: http://dx.doi.org/10.3390/metabo2010100), vol: 2, issue: 1, pages: 100-133, 2012

Type: Journal article - Journal article

DOI: 10.3390/metabo2010100

Significance and occurrence of fumonisins from Aspergillus niger

Mogensen, Jesper Mølgaard ; Nielsen, Kristian Fog ; Larsen, Thomas Ostenfeld ; Frisvad, Jens Christian

Type: Ph.d. thesis - Ph.d. thesis

Microbial isoprenoid production

Carlsen, Simon ; Kielland-Brandt, Morten ; Eliasson Lantz, Anna ; Nielsen, Michael Lynge

Type: Ph.d. thesis - Ph.d. thesis

Delimitation and characterisation of Talaromyces purpurogenus and related species

Yilmaz, N. ; Houbraken, J. ; Hoekstra, E. S. ; Frisvad, Jens Christian ; Visagie, C. M. ; Samson, Ramona

in journal: Persoonia (ISSN: 0031-5850) (DOI: http://dx.doi.org/10.3767/003158512X659500), vol: 29, pages: 39-54, 2012

Type: Journal article - Journal article

DOI: 10.3767/003158512X659500

Regulatory processes in Aspergillus niger

Poulsen, Lars ; Thykær, Jette ; Eliasson Lantz, Anna

Type: Ph.d. thesis - Ph.d. thesis

Chemical analysis of a genome wide polyketide synthase gene deletion library in Aspergillus nidulans

Larsen, Thomas Ostenfeld ; Klejnstrup, Marie Louise ; Nielsen, Jakob Blæsbjerg ; Holm, Dorte Koefoed ; Petersen, Lene Maj ; Klitgaard, Andreas ; Nielsen, Kristian Fog ; Andersen, Mikael Rørdam ; Mortensen, Uffe Hasbro

Type: Conference abstract for conference - Conference abstract for conference

Presented at: Directing Biosynthesis III, Nottingham

Chitin elicitation of natural product production in marine bacteria

Månsson, Maria ; Wietz, Matthias ; Larsen, Thomas Ostenfeld ; Gram, Lone

Type: Conference abstract for conference - Conference abstract for conference

Presented at: Gordon Conference on Marine Natural Products, Venture, CA